BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020E08SP1|AL427632
(874 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1369 1651 0.0
>3x_Contig1369
Length = 7461
Score = 1651 bits (826), Expect = 0.0
Identities = 860/874 (98%), Gaps = 3/874 (0%)
Strand = Plus / Minus
Query: 3 agctgctgctgctgttgttgcattctgcaattgctgctgctgctgttgttgttgttgttg 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4733 agctgctgctgctgttgttgcattctgcaattgctgctgctgctgttgttgttgttgttg 4674
Query: 63 ttgttgtcgctgctgctgttgtctggcagccatcctcaacacagccgtatagtactggta 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4673 ttgttgtcgctgctgctgttgtctggcagccatcctcaacacagccgtatagtactggta 4614
Query: 123 ctccttcatagactcgacattcgcaccatgttcgttacgaagctgctgccaccgcag-ta 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 4613 ctccttcatagactcgacattcgcaccatgttcgttacgaagctgctgccaccgcaggta 4554
Query: 182 gcaacgattaahctcttcacgcgtatatyccctcctgggaggactgaactcwaaatccat 241
||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 4553 gcaacgattaatctcttcacgcgtatattccctcctgggaggactgaactctaaatccat 4494
Query: 242 tgccaaaacaggcctatcgcaacactaatachaawactattaccagtaataaaaacgcct 301
||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |
Sbjct: 4493 tgccaaaacaggcctatcgcaacactaatactaatactattaccagtaataaaaacgctt 4434
Query: 302 gtcactagcaaagagagcaaagcaattcttaattcaagccgaagctaaaggataaacaaa 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4433 gtcactagcaaagagagcaaagcaattcttaattcaagccgaagctaaaggataaacaaa 4374
Query: 362 aaacagaaaaagtactgcttagccgccgacgatatggcactgcagactatccgaaaagta 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4373 aaacagaaaaagtactgcttagccgccgacgatatggcactgcagactatccgaaaagta 4314
Query: 422 aaahaccaaccgaag-aagttaccttaaacacacgcaaagcctgtatgcacaacggttct 480
||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4313 aaataccaaccgaaggaagttaccttaaacacacgcaaagcctgtatgcacaacggttct 4254
Query: 481 gttgttttctgtgtttatttcccttctccgtttccgtttactaaagtyattttgtttatg 540
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 4253 gttgttttctgtgtttatttcccttctccgtttccgtttactaaagttattttgtttatg 4194
Query: 541 ttttacagcgtaacacaaaaaaaaattttytttttgtgtaaathattcgcttttgtaatc 600
||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 4193 ttttacagcgtaacacaaaaaaaaattttttttttgtgtaaattattcgcttttgtaatc 4134
Query: 601 atgcyttctgtgtgaattttgactggcactggggcttaaaacatgggtttaaagcacact 660
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4133 atgctttctgtgtgaattttgactggcactggggcttaaaacatgggtttaaagcacact 4074
Query: 661 ttaaggcaagtttaagacatacgtttgaggcgttaagagtatgtcgggatggaactggac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4073 ttaaggcaagtttaagacatacgtttgaggcgttaagagtatgtcgggatggaactggac 4014
Query: 721 aatagctgcggaatatacaagatgacgtgctgcatgtgtgtatataagatacatagatat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4013 aatagctgcggaatatacaagatgacgtgctgcatgtgtgtatataagatacatagatat 3954
Query: 781 ggatatacattttagggatgtgcgc-gtacatgcaagtgtacagtggaatctgatatgga 839
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 3953 ggatatacattttagggatgtgcgcagtacatgcaagtgtacagtggaatctgatatgga 3894
Query: 840 ttgaatggatatagtgacagaccccccccccccc 873
||||||||||||||||||||||||||||||||||
Sbjct: 3893 ttgaatggatatagtgacagaccccccccccccc 3860
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9261
Number of Sequences: 1807
Number of extensions: 9261
Number of successful extensions: 879
Number of sequences better than 1.0e-20: 1
length of query: 874
length of database: 10,358,551
effective HSP length: 16
effective length of query: 858
effective length of database: 10,329,639
effective search space: 8862830262
effective search space used: 8862830262
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)